WebAMR
Web interface for
AMRFinderPlus
and
AMRrules
Documentation
AMRFinderPlus
v4.2.7
database
2026-08-07.1
| AMRrules
v1.0.1
Job name
(optional):
Optional. Max 100 characters. Letters, numbers, spaces, underscores, and hyphens only.
Assembled
nucleotide FASTA
:
GFF file
& format:
Annotation format
:
bakta
genbank
microscope
patric
pgap
prodigal
prokka
pseudomonasdb
rast
standard
Annotation format only applies when uploading a GFF file.
Protein FASTA
:
Organism group
(optional):
None
Acinetobacter_baumannii
Bordetella_pertussis
Burkholderia_cepacia
Burkholderia_mallei
Burkholderia_pseudomallei
Campylobacter
Citrobacter_freundii
Clostridioides_difficile
Corynebacterium_diphtheriae
Enterobacter_asburiae
Enterobacter_cloacae
Enterococcus_faecalis
Enterococcus_faecium
Escherichia
Haemophilus_influenzae
Helicobacter_pylori
Klebsiella_oxytoca
Klebsiella_pneumoniae
Neisseria_gonorrhoeae
Neisseria_meningitidis
Pseudomonas_aeruginosa
Salmonella
Serratia_marcescens
Staphylococcus_aureus
Staphylococcus_pseudintermedius
Streptococcus_agalactiae
Streptococcus_pneumoniae
Streptococcus_pyogenes
Vibrio_cholerae
Vibrio_parahaemolyticus
Vibrio_vulnificus
AMRrules organism
(optional):
Auto-mapped from AMRFinderPlus organism
None / Do not run AMRrules
s__Acinetobacter baumannii
s__Bordetella pertussis
s__Burkholderia pseudomallei
s__Campylobacter jejuni
s__Enterobacter hormaechei
s__Enterobacter roggenkampii
s__Enterococcus faecalis
s__Enterococcus faecium
s__Escherichia coli
s__Klebsiella oxytoca
s__Klebsiella pneumoniae
s__Neisseria gonorrhoeae
s__Neisseria meningitidis
s__Pseudomonas aeruginosa
s__Salmonella enterica
s__Staphylococcus aureus
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Disclaimer: This is a personal side-project. This site and software do not reflect the priorities or opinions of my employer. Use of the results is at your own risk. See
AMRFinderPlus
and
AMRrules
for details.